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  5. Pir_g16249

Pir_g16249


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g16249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00149140 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Ala_g34499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.35G024600.1 Ceric.35G024600 not classified & original description: pacid=50580868... 0.03 OrthoFinder output from all 47 species
Dac_g26800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_12652g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 270.0) 0.02 OrthoFinder output from all 47 species
Msp_g12311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005045 No alias not classified & original description: CDS=5-796 0.02 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g074380.4.1 Solyc09g074380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g04772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 559 594
IPR013989 Dev_and_cell_death_domain 28 160
No external refs found!