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  5. Pir_g15842

Pir_g15842


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g15842

Target Alias Description ECC score Gene Family Method Actions
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
Als_g33847 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04252 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0031.g024472 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g16839 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
MA_21538g0020 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g24340 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g10674 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g11723 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo441930 KAN, KAN1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Spa_g09479 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g22307 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e022412_P003 KAN2, Zm00001e022412 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 530 574
IPR001005 SANT/Myb 445 495
No external refs found!