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Aliases : HSL1, VAL2, HSI2-L1
Description : LAV-VAL-type transcription factor & original description: none
Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g15431 | |
| Cluster | HCCA: Cluster_262 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g27437 | HSL1, VAL2, HSI2-L1 | LAV-VAL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g23897 | HSL1, VAL2, HSI2-L1 | LAV-VAL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10233 | HSI2, VAL1 | LAV-VAL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g09028 | No alias | LAV-VAL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12005 | HSL1, VAL2, HSI2-L1 | LAV-VAL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| CC | GO:0005759 | mitochondrial matrix | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| CC | GO:0043233 | organelle lumen | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| CC | GO:0070013 | intracellular organelle lumen | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003340 | B3_DNA-bd | 220 | 320 |
| No external refs found! |