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  5. Pir_g14955

Pir_g14955


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g14955

Target Alias Description ECC score Gene Family Method Actions
Ala_g07789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06353 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g18764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010264 No alias not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038899 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2004 0.02 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.01 OrthoFinder output from all 47 species
Azfi_s0242.g059819 No alias not classified & original description: CDS=1-2853 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.01 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.01 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.01 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.01 OrthoFinder output from all 47 species
Cba_g07737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29993 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G076500.1 Ceric.14G076500 not classified & original description: pacid=50633826... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.01 OrthoFinder output from all 47 species
Dac_g13741 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17227 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13073 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22778 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26505 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g09089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g39215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g49449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018767 No alias not classified & original description: CDS=1-2967 0.02 OrthoFinder output from all 47 species
Sam_g09276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g11517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 422 449
IPR002885 Pentatricopeptide_repeat 823 846
IPR002885 Pentatricopeptide_repeat 535 564
IPR002885 Pentatricopeptide_repeat 506 527
IPR002885 Pentatricopeptide_repeat 785 814
IPR002885 Pentatricopeptide_repeat 622 646
IPR002885 Pentatricopeptide_repeat 652 676
IPR002885 Pentatricopeptide_repeat 301 348
IPR002885 Pentatricopeptide_repeat 201 247
No external refs found!