AT5G13840 (FZR3)

Aliases : FZR3

Description : FIZZY-related 3

Gene families : OG_01_0000394 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000394_tree ,
OG_02_0001854 (LandPlants) Phylogenetic Tree(s): OG_02_0001854_tree ,
OG_03_0001931 (SeedPlants) Phylogenetic Tree(s): OG_03_0001931_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G13840
Cluster	HCCA: Cluster_253

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00242760	evm_27.TU.AmTr_v1...	Cell cycle.mitosis and meiosis.metaphase to anaphase...	0.03	Archaeplastida
LOC_Os01g74146.1	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.03	Archaeplastida
LOC_Os04g51110.1	No alias	CDC20-type (APC/C)-dependent ubiquitination activator protein	0.04	Archaeplastida
MA_10290598g0010	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.02	Archaeplastida
MA_138205g0010	No alias	CDC20-type (APC/C)-dependent ubiquitination activator protein	0.03	Archaeplastida
Mp3g00030.1	No alias	CDC20-type (APC/C)-dependent ubiquitination activator protein	0.02	Archaeplastida
Pp3c8_6330V3.1	No alias	Transducin family protein / WD-40 repeat family protein	0.02	Archaeplastida
Solyc06g072830.4.1	No alias	CDC20-type (APC/C)-dependent ubiquitination activator protein	0.03	Archaeplastida
Zm00001e014230_P001	No alias	CDC20-type (APC/C)-dependent ubiquitination activator protein	0.03	Archaeplastida
Zm00001e018501_P001	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.03	Archaeplastida
AMTR_s00012p00242760	evm_27.TU.AmTr_v1...	Cell cycle.mitosis and meiosis.metaphase to anaphase...	0.03	LandPlants
LOC_Os01g74146.1	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.03	LandPlants
MA_10290598g0010	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.02	LandPlants
Zm00001e018501_P001	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.03	LandPlants
AMTR_s00012p00242760	evm_27.TU.AmTr_v1...	Cell cycle.mitosis and meiosis.metaphase to anaphase...	0.03	SeedPlants
LOC_Os01g74146.1	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.04	SeedPlants
MA_10290598g0010	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.02	SeedPlants
Zm00001e018501_P001	No alias	CDH1-type (APC/C)-dependent ubiquitination activator protein	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
BP	GO:0001558	regulation of cell growth	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004871	obsolete signal transducer activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005834	heterotrimeric G-protein complex	ISS	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-dependent DNA replication	None	Extended
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	RCA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006342	chromatin silencing	RCA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007051	spindle organization	None	Extended
BP	GO:0007165	signal transduction	ISS	Interproscan
BP	GO:0007276	gamete generation	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0008283	cell population proliferation	RCA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016458	gene silencing	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0031047	gene silencing by RNA	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032875	regulation of DNA endoreduplication	RCA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034401	chromatin organization involved in regulation of transcription	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0040029	regulation of gene expression, epigenetic	None	Extended
BP	GO:0042023	DNA endoreduplication	RCA	Interproscan
BP	GO:0042127	regulation of cell population proliferation	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043248	proteasome assembly	RCA	Interproscan
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0045892	negative regulation of transcription, DNA-templated	None	Extended
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051225	spindle assembly	RCA	Interproscan
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051302	regulation of cell division	RCA	Interproscan
BP	GO:0051510	regulation of unidimensional cell growth	RCA	Interproscan
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0051788	response to misfolded protein	RCA	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090329	regulation of DNA-dependent DNA replication	None	Extended
BP	GO:0097549	chromatin organization involved in negative regulation of transcription	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
CC	GO:1905360	GTPase complex	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	291	326
IPR001680	WD40_repeat	331	371
IPR001680	WD40_repeat	420	456

External Links

No external refs found!

AT5G13840 (FZR3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation