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  5. Pir_g14677

Pir_g14677 (emb1354, CDC48C)


Aliases : emb1354, CDC48C

Description : platform ATPase CDC48 & original description: none


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g14677

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0115.g046252 emb1354, CDC48C platform ATPase CDC48 & original description: CDS=1-2478 0.03 OrthoFinder output from all 47 species
Cba_g22418 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77518 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G061700.1 emb1354, CDC48C,... platform ATPase CDC48 & original description:... 0.02 OrthoFinder output from all 47 species
Cre09.g398550 emb1354, CDC48C Cell division control protein 48 homolog C... 0.01 OrthoFinder output from all 47 species
Dde_g02340 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23090 CDC48B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13016 CIP111 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17721 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012761_P001 Zm00001e012761 platform ATPase (CDC48) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004061 arylformamidase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR031996 NVL2_nucleolin-bd 21 82
IPR041569 AAA_lid_3 545 578
IPR041569 AAA_lid_3 864 904
IPR003959 ATPase_AAA_core 373 519
IPR003959 ATPase_AAA_core 712 841
No external refs found!