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  5. Pir_g14452

Pir_g14452


Description : mitochondrial RNA splicing factor *(ABO5) & original description: none


Gene families : OG0005617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005617_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g14452

Target Alias Description ECC score Gene Family Method Actions
Adi_g014392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04436 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Als_g56987 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Ceric.08G062900.1 Ceric.08G062900 mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g08999 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g49410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 322 350
IPR002885 Pentatricopeptide_repeat 656 714
IPR002885 Pentatricopeptide_repeat 519 575
IPR002885 Pentatricopeptide_repeat 401 437
IPR002885 Pentatricopeptide_repeat 598 647
IPR002885 Pentatricopeptide_repeat 355 399
No external refs found!