Pir_g14104


Description : GARP subgroup HHO transcription factor & original description: none


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g14104
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00110710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00122p00127250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 OrthoFinder output from all 47 species
AT1G13300 HRS1 myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT2G03500 No alias Homeodomain-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G37180 No alias Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g019107 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g23352 No alias GARP subgroup HHO transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aob_g30627 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g22464 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.16G011700.1 Ceric.16G011700 GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08160.1 LOC_Os01g08160 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
LOC_Os02g22020.1 LOC_Os02g22020 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g03258 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g31164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g006800.2.1 Solyc12g006800 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g55019 No alias GARP subgroup HHO transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g55258 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g11367 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011977_P003 Zm00001e011977 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e016724_P001 Zm00001e016724 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 268 319
No external refs found!