AT5G13000 (gsl12, ATGSL12)

Aliases : gsl12, ATGSL12

Description : glucan synthase-like 12

Gene families : OG_01_0000126 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000126_tree ,
OG_02_0000405 (LandPlants) Phylogenetic Tree(s): OG_02_0000405_tree ,
OG_03_0000364 (SeedPlants) Phylogenetic Tree(s): OG_03_0000364_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G13000
Cluster	HCCA: Cluster_215

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00098420	evm_27.TU.AmTr_v1...	Cell wall.callose.callose synthase	0.04	Archaeplastida
AT1G06490	GSL7, ATGSL07,...	glucan synthase-like 7	0.05	Archaeplastida
GSVIVT01007560001	No alias	Cell wall.callose.callose synthase	0.04	Archaeplastida
GSVIVT01020548001	No alias	Cell wall.callose.callose synthase	0.04	Archaeplastida
GSVIVT01025370001	No alias	Cell wall.callose.callose synthase	0.04	Archaeplastida
Gb_01752	No alias	callose synthase	0.03	Archaeplastida
Gb_06219	No alias	callose synthase	0.04	Archaeplastida
Gb_22029	No alias	callose synthase	0.04	Archaeplastida
Gb_37962	No alias	callose synthase	0.03	Archaeplastida
LOC_Os06g51270.1	No alias	callose synthase	0.05	Archaeplastida
MA_111976g0010	No alias	callose synthase	0.03	Archaeplastida
MA_229544g0010	No alias	callose synthase	0.05	Archaeplastida
MA_377758g0010	No alias	callose synthase	0.03	Archaeplastida
MA_40978g0030	No alias	callose synthase	0.02	Archaeplastida
MA_735748g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp3g24830.1	No alias	callose synthase	0.05	Archaeplastida
Pp3c24_1607V3.1	No alias	glucan synthase-like 10	0.02	Archaeplastida
Pp3c4_15060V3.1	No alias	glucan synthase-like 5	0.07	Archaeplastida
Pp3c9_4143V3.1	No alias	callose synthase 5	0.03	Archaeplastida
Smo163802	No alias	Cell wall.callose.callose synthase	0.03	Archaeplastida
Smo267830	No alias	Cell wall.callose.callose synthase	0.03	Archaeplastida
Smo439692	No alias	Cell wall.callose.callose synthase	0.03	Archaeplastida
Solyc01g006370.3.1	No alias	callose synthase	0.04	Archaeplastida
Solyc02g078230.2.1	No alias	callose synthase	0.05	Archaeplastida
Zm00001e000142_P001	No alias	callose synthase	0.03	Archaeplastida
Zm00001e013335_P001	No alias	callose synthase	0.07	Archaeplastida
Zm00001e030137_P001	No alias	callose synthase	0.07	Archaeplastida
AMTR_s00044p00098420	evm_27.TU.AmTr_v1...	Cell wall.callose.callose synthase	0.04	LandPlants
AT1G06490	GSL7, ATGSL07,...	glucan synthase-like 7	0.05	LandPlants
Gb_06219	No alias	callose synthase	0.04	LandPlants
LOC_Os06g51270.1	No alias	callose synthase	0.05	LandPlants
MA_735748g0010	No alias	no hits & (original description: none)	0.02	LandPlants
Mp3g24830.1	No alias	callose synthase	0.05	LandPlants
Pp3c9_4143V3.1	No alias	callose synthase 5	0.03	LandPlants
Smo163802	No alias	Cell wall.callose.callose synthase	0.03	LandPlants
Smo267830	No alias	Cell wall.callose.callose synthase	0.03	LandPlants
Solyc01g006370.3.1	No alias	callose synthase	0.04	LandPlants
Solyc11g005980.3.1	No alias	callose synthase	0.02	LandPlants
Zm00001e013335_P001	No alias	callose synthase	0.08	LandPlants
Zm00001e014323_P001	No alias	callose synthase	0.02	LandPlants
Zm00001e030137_P001	No alias	callose synthase	0.06	LandPlants
AMTR_s00044p00098420	evm_27.TU.AmTr_v1...	Cell wall.callose.callose synthase	0.04	SeedPlants
AMTR_s00150p00030620	evm_27.TU.AmTr_v1...	Cell wall.callose.callose synthase	0.01	SeedPlants
AT1G06490	GSL7, ATGSL07,...	glucan synthase-like 7	0.05	SeedPlants
Gb_06219	No alias	callose synthase	0.04	SeedPlants
Gb_32712	No alias	callose synthase	0.02	SeedPlants
LOC_Os06g08380.1	No alias	callose synthase	0.02	SeedPlants
LOC_Os06g51270.1	No alias	callose synthase	0.05	SeedPlants
MA_735748g0010	No alias	no hits & (original description: none)	0.02	SeedPlants
Solyc01g006370.3.1	No alias	callose synthase	0.03	SeedPlants
Solyc11g005980.3.1	No alias	callose synthase	0.02	SeedPlants
Zm00001e013335_P001	No alias	callose synthase	0.08	SeedPlants
Zm00001e030137_P001	No alias	callose synthase	0.06	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	ISS	Interproscan
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
BP	GO:0002252	immune effector process	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	ISS	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006333	chromatin assembly or disassembly	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin assembly	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007267	cell-cell signaling	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009556	microsporogenesis	RCA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	None	Extended
BP	GO:0009616	RNAi-mediated antiviral immune response	RCA	Interproscan
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	posttranscriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016246	RNA interference	RCA	Interproscan
BP	GO:0016441	posttranscriptional gene silencing	None	Extended
BP	GO:0016458	gene silencing	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	ISS	Interproscan
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0023052	signaling	None	Extended
BP	GO:0030422	production of siRNA involved in RNA interference	None	Extended
BP	GO:0031047	gene silencing by RNA	None	Extended
BP	GO:0031048	heterochromatin assembly by small RNA	RCA	Interproscan
BP	GO:0031050	dsRNA processing	None	Extended
BP	GO:0031497	chromatin assembly	None	Extended
BP	GO:0031507	heterochromatin assembly	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033037	polysaccharide localization	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034293	sexual sporulation	None	Extended
BP	GO:0034401	chromatin organization involved in regulation of transcription	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0035194	post-transcriptional gene silencing by RNA	None	Extended
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	RCA	Interproscan
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043934	sporulation	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0048236	plant-type sporogenesis	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051321	meiotic cell cycle	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0051607	defense response to virus	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0052386	cell wall thickening	None	Extended
BP	GO:0052543	callose deposition in cell wall	RCA	Interproscan
BP	GO:0052545	callose localization	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0097549	chromatin organization involved in negative regulation of transcription	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140546	defense response to symbiont	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003440	Glyco_trans_48	1148	1847
IPR026899	FKS1-like_dom1	322	434
IPR039431	Vta1/CALS_N	45	173

External Links

No external refs found!

AT5G13000 (gsl12, ATGSL12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation