AT5G12470

Description : Protein of unknown function (DUF3411)

Gene families : OG_01_0003119 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003119_tree ,
OG_02_0003172 (LandPlants) Phylogenetic Tree(s): OG_02_0003172_tree ,
OG_03_0003508 (SeedPlants) Phylogenetic Tree(s): OG_03_0003508_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G12470

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000863.14	No alias	Protein RETICULATA-RELATED 4, chloroplastic...	0.01	Archaeplastida
Mp2g08400.1	No alias	Protein RETICULATA-RELATED 4, chloroplastic...	0.05	Archaeplastida
Mp2g08400.1	No alias	Protein RETICULATA-RELATED 4, chloroplastic...	0.05	LandPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009528	plastid inner membrane	None	Extended
CC	GO:0009536	plastid	IDA	Interproscan
CC	GO:0009706	chloroplast inner membrane	IDA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031969	chloroplast membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR021825	RETICULATA-related	160	337

External Links

No external refs found!