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  5. Pir_g13630

Pir_g13630


Description : transcription factor *(NIN) & original description: none


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13630

Target Alias Description ECC score Gene Family Method Actions
AT3G59580 No alias Plant regulator RWP-RK family protein 0.02 OrthoFinder output from all 47 species
Ala_g02678 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06587 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023886001 No alias External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Lfl_g08607 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 753 800
IPR000270 PB1_dom 1111 1190
No external refs found!