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  5. Pir_g13626

Pir_g13626 (SEU)


Aliases : SEU

Description : adapter component *(SEU/SLK) of transcriptional co-repressor complex & original description: none


Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13626

Target Alias Description ECC score Gene Family Method Actions
AT1G43850 SEU SEUSS transcriptional co-regulator 0.03 OrthoFinder output from all 47 species
Adi_g049834 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Aev_g15254 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Ala_g02698 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Ceric.01G063700.1 SEU, Ceric.01G063700 adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Ceric.03G041400.1 SEU, Ceric.03G041400 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Ceric.33G002300.1 SEU, Ceric.33G002300 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Ehy_g23719 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
GSVIVT01010616001 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04218 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g05019 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Lfl_g06246 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
MA_12796g0010 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_13825g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_208023g0010 SLK2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g42762 SEU adapter component *(SEU/SLK) of transcriptional... 0.01 OrthoFinder output from all 47 species
Ppi_g04706 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Solyc03g026190.3.1 SLK2, Solyc03g026190 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g059750.3.1 SEU, Solyc06g059750 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g20497 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Zm00001e011073_P001 SEU, Zm00001e011073 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e021381_P001 SEU, Zm00001e021381 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039584_P001 SEU, Zm00001e039584 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 381 639
No external refs found!