Pir_g13585

Description : associated component *(HDC1) of histone deacetylase machineries & original description: none

Gene families : OG0004198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004198_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g13585

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene47293.t1	Aspi01Gene47293	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03126	No alias	associated component *(HDC1) of histone deacetylase...	0.04	OrthoFinder output from all 47 species
LOC_Os07g29450.1	LOC_Os07g29450	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_18805g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018699	No alias	associated component *(HDC1) of histone deacetylase...	0.03	OrthoFinder output from all 47 species
Tin_g13819	No alias	associated component *(HDC1) of histone deacetylase...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006476	protein deacetylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016575	histone deacetylation	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0035601	protein deacylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0098732	macromolecule deacylation	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013951	Rxt3	523	565

External Links

No external refs found!