AT5G12330 (LRP1)

Aliases : LRP1

Description : Lateral root primordium (LRP) protein-related

Gene families : OG_01_0001199 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001199_tree ,
OG_02_0000755 (LandPlants) Phylogenetic Tree(s): OG_02_0000755_tree ,
OG_03_0000578 (SeedPlants) Phylogenetic Tree(s): OG_03_0000578_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G12330
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00063p00161200	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SRS...	0.04	Archaeplastida
GSVIVT01009812001	No alias	RNA biosynthesis.transcriptional activation.SRS...	0.05	Archaeplastida
GSVIVT01024206001	No alias	RNA biosynthesis.transcriptional activation.SRS...	0.03	Archaeplastida
LOC_Os01g72490.1	No alias	transcription factor (SRS)	0.05	Archaeplastida
LOC_Os05g32070.1	No alias	transcription factor (SRS)	0.06	Archaeplastida
LOC_Os06g49830.1	No alias	transcription factor (SRS)	0.05	Archaeplastida
LOC_Os08g43410.1	No alias	transcription factor (SRS)	0.06	Archaeplastida
LOC_Os09g36160.1	No alias	transcription factor (SRS)	0.05	Archaeplastida
MA_2299g0010	No alias	transcription factor (SRS)	0.03	Archaeplastida
Solyc04g080970.4.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
Solyc10g054070.1.1	No alias	transcription factor (SRS)	0.02	Archaeplastida
Solyc11g064800.3.1	No alias	transcription factor (SRS)	0.04	Archaeplastida
Zm00001e004006_P001	No alias	transcription factor (SRS)	0.03	Archaeplastida
Zm00001e010227_P001	No alias	transcription factor (SRS)	0.05	Archaeplastida
Zm00001e013256_P002	No alias	transcription factor (SRS)	0.05	Archaeplastida
Zm00001e024681_P001	No alias	transcription factor (SRS)	0.03	Archaeplastida
Zm00001e026854_P001	No alias	transcription factor (SRS)	0.06	Archaeplastida
Zm00001e028304_P001	No alias	transcription factor (SRS)	0.07	Archaeplastida
Zm00001e030189_P001	No alias	transcription factor (SRS)	0.06	Archaeplastida
Zm00001e031567_P001	No alias	transcription factor (SRS)	0.06	Archaeplastida
Zm00001e034798_P001	No alias	transcription factor (SRS)	0.07	Archaeplastida
AMTR_s00063p00161200	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SRS...	0.04	LandPlants
GSVIVT01009812001	No alias	RNA biosynthesis.transcriptional activation.SRS...	0.05	LandPlants
LOC_Os01g72490.1	No alias	transcription factor (SRS)	0.05	LandPlants
LOC_Os05g32070.1	No alias	transcription factor (SRS)	0.06	LandPlants
LOC_Os06g49830.1	No alias	transcription factor (SRS)	0.05	LandPlants
LOC_Os08g43410.1	No alias	transcription factor (SRS)	0.06	LandPlants
LOC_Os09g36160.1	No alias	transcription factor (SRS)	0.05	LandPlants
MA_2299g0010	No alias	transcription factor (SRS)	0.03	LandPlants
Solyc04g080970.4.1	No alias	no hits & (original description: none)	0.06	LandPlants
Solyc10g054070.1.1	No alias	transcription factor (SRS)	0.02	LandPlants
Solyc11g064800.3.1	No alias	transcription factor (SRS)	0.04	LandPlants
Zm00001e004006_P001	No alias	transcription factor (SRS)	0.03	LandPlants
Zm00001e010227_P001	No alias	transcription factor (SRS)	0.05	LandPlants
Zm00001e013256_P002	No alias	transcription factor (SRS)	0.05	LandPlants
Zm00001e024681_P001	No alias	transcription factor (SRS)	0.03	LandPlants
Zm00001e026854_P001	No alias	transcription factor (SRS)	0.06	LandPlants
Zm00001e028304_P001	No alias	transcription factor (SRS)	0.05	LandPlants
Zm00001e030189_P001	No alias	transcription factor (SRS)	0.06	LandPlants
Zm00001e031567_P001	No alias	transcription factor (SRS)	0.06	LandPlants
Zm00001e034798_P001	No alias	transcription factor (SRS)	0.07	LandPlants
AMTR_s00063p00161200	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SRS...	0.02	SeedPlants
GSVIVT01009812001	No alias	RNA biosynthesis.transcriptional activation.SRS...	0.02	SeedPlants
LOC_Os01g72490.1	No alias	transcription factor (SRS)	0.05	SeedPlants
LOC_Os05g32070.1	No alias	transcription factor (SRS)	0.04	SeedPlants
LOC_Os06g49830.1	No alias	transcription factor (SRS)	0.05	SeedPlants
LOC_Os08g43410.1	No alias	transcription factor (SRS)	0.05	SeedPlants
LOC_Os09g36160.1	No alias	transcription factor (SRS)	0.05	SeedPlants
MA_2299g0010	No alias	transcription factor (SRS)	0.02	SeedPlants
Solyc04g080970.4.1	No alias	no hits & (original description: none)	0.04	SeedPlants
Solyc11g064800.3.1	No alias	transcription factor (SRS)	0.02	SeedPlants
Zm00001e010227_P001	No alias	transcription factor (SRS)	0.03	SeedPlants
Zm00001e013256_P002	No alias	transcription factor (SRS)	0.03	SeedPlants
Zm00001e024681_P001	No alias	transcription factor (SRS)	0.02	SeedPlants
Zm00001e026854_P001	No alias	transcription factor (SRS)	0.02	SeedPlants
Zm00001e028304_P001	No alias	transcription factor (SRS)	0.03	SeedPlants
Zm00001e030189_P001	No alias	transcription factor (SRS)	0.06	SeedPlants
Zm00001e034798_P001	No alias	transcription factor (SRS)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	ND	Interproscan
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0010638	positive regulation of organelle organization	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022610	biological adhesion	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	None	Extended
BP	GO:0030838	positive regulation of actin filament polymerization	None	Extended
BP	GO:0031334	positive regulation of protein-containing complex assembly	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032273	positive regulation of protein polymerization	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IPI	Interproscan
BP	GO:0043254	regulation of protein-containing complex assembly	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044089	positive regulation of cellular component biogenesis	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051495	positive regulation of cytoskeleton organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
BP	GO:0099402	plant organ development	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902905	positive regulation of supramolecular fiber organization	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G12330 (LRP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation