AT5G11890


Description : FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG_01_0000075 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000075_tree ,
OG_02_0000224 (LandPlants) Phylogenetic Tree(s): OG_02_0000224_tree ,
OG_03_0001564 (SeedPlants) Phylogenetic Tree(s): OG_03_0001564_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G11890
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
AT3G11660 NHL1 NDR1/HIN1-like 1 0.04 Archaeplastida
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_01970 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_41030 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g39290.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_313447g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3652531g0010 No alias No annotation 0.04 Archaeplastida
MA_63890g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_669170g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c23_11590V3.1 No alias NDR1/HIN1-like 2 0.02 Archaeplastida
Pp3c23_12930V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
Solyc01g007220.4.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g150145.1.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g095980.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e025983_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027782_P001 No alias No annotation 0.04 Archaeplastida
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.02 LandPlants
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 LandPlants
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.04 LandPlants
Gb_31759 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 LandPlants
Gb_41030 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os01g09880.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os01g39290.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.03 LandPlants
MA_313447g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_3652531g0010 No alias No annotation 0.04 LandPlants
Pp3c10_5660V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 LandPlants
Pp3c23_11590V3.1 No alias NDR1/HIN1-like 2 0.02 LandPlants
Pp3c23_12930V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 LandPlants
Solyc12g095980.2.1 No alias no hits & (original description: none) 0.05 LandPlants
Zm00001e027782_P001 No alias No annotation 0.04 LandPlants
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 SeedPlants
Gb_41030 No alias no hits & (original description: none) 0.03 SeedPlants
LOC_Os01g09880.1 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os05g11010.1 No alias no hits & (original description: none) 0.03 SeedPlants
MA_313447g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc12g095980.2.1 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e027782_P001 No alias No annotation 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!