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  5. Pir_g13039

Pir_g13039 (SPA4)


Aliases : SPA4

Description : regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & original description: none


Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g13039

Target Alias Description ECC score Gene Family Method Actions
AT2G32950 FUS1, EMB168,... Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g015282 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Ala_g07122 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Ala_g07511 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Ala_g09701 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.05 OrthoFinder output from all 47 species
Als_g24085 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.06 OrthoFinder output from all 47 species
Aob_g05358 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Aop_g21616 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Cba_g15102 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.04 OrthoFinder output from all 47 species
Cre02.g085050 FUS1, EMB168,... E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g23991 SPA4 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ehy_g13155 SPA2 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
GSVIVT01007271001 FUS1, EMB168,... External stimuli response.light.red/far red... 0.03 OrthoFinder output from all 47 species
GSVIVT01020559001 SPA3 Protein modification.phosphorylation.PEK kinase 0.03 OrthoFinder output from all 47 species
LOC_Os01g52640.3 SPA4, LOC_Os01g52640 protein kinase (PEK) 0.05 OrthoFinder output from all 47 species
LOC_Os05g49590.1 SPA1, LOC_Os05g49590 protein kinase (PEK). regulator component SPA of... 0.02 OrthoFinder output from all 47 species
MA_423393g0010 SPA3 protein kinase (PEK). regulator component SPA of... 0.03 OrthoFinder output from all 47 species
Mp5g12010.1 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.05 OrthoFinder output from all 47 species
Ore_g26130 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Sam_g08955 No alias component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Sam_g30164 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Sam_g50430 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Smo171333 FUS1, EMB168,... External stimuli response.light.red/far red... 0.03 OrthoFinder output from all 47 species
Smo98534 SPA4 External stimuli response.light.red/far red... 0.02 OrthoFinder output from all 47 species
Spa_g55052 SPA4 regulatory component *(Spa) of COP1-Spa light signal... 0.03 OrthoFinder output from all 47 species
Zm00001e019928_P005 SPA4, Zm00001e019928 protein kinase (PEK). regulator component SPA of... 0.03 OrthoFinder output from all 47 species
Zm00001e028209_P002 SPA4, Zm00001e028209 protein kinase (PEK). regulator component SPA of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008531 riboflavin kinase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 871 908
No external refs found!