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  5. Pir_g12939

Pir_g12939


Description : not classified & original description: none


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12939

Target Alias Description ECC score Gene Family Method Actions
Ala_g12666 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07023 FKD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018032001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_33098 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g26906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g17610.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g12084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008546 VAN3-bd-like_auxin_canal 43 304
IPR013666 PH_pln 336 440
No external refs found!