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  5. Pir_g12909

Pir_g12909


Description : histone methyltransferase *(ATXR1) & original description: none


Gene families : OG0000533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12909

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00266780 ATXR1, SDG35,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Adi_g084082 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06502 No alias histone methyltransferase *(ATXR1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12748 No alias histone methyltransferase *(ATXR1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27658 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G076300.1 Ceric.02G076300 histone methyltransferase *(ATXR1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.39G017700.1 Ceric.39G017700 histone methyltransferase *(ATXR1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02218 No alias histone methyltransferase *(ATXR1) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11184 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20561 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14428 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16761 No alias histone methyltransferase *(ATXR1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49709 No alias histone methyltransferase *(ATXR1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31778 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 121 283
No external refs found!