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  5. Pir_g12548

Pir_g12548


Description : substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0002069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12548

Target Alias Description ECC score Gene Family Method Actions
Aop_g13909 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dcu_g12317 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 341 361
IPR001611 Leu-rich_rpt 86 106
IPR001611 Leu-rich_rpt 495 518
IPR001611 Leu-rich_rpt 442 466
IPR001611 Leu-rich_rpt 218 237
IPR001611 Leu-rich_rpt 367 390
IPR001611 Leu-rich_rpt 418 441
IPR001611 Leu-rich_rpt 468 492
IPR001611 Leu-rich_rpt 572 594
IPR001611 Leu-rich_rpt 189 212
IPR001611 Leu-rich_rpt 138 161
No external refs found!