Pir_g12401


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12401

Target Alias Description ECC score Gene Family Method Actions
AT5G65570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g025632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042918 CRR21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051856 RARE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34560 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26948 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024917 No alias not classified & original description: CDS=1-3621 0.01 OrthoFinder output from all 47 species
Cba_g03367 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g06483 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74874 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g77212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G008500.1 Ceric.24G008500 not classified & original description: pacid=50628459... 0.05 OrthoFinder output from all 47 species
Dac_g09153 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22525 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_07914 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006801 EMB2261 not classified & original description: CDS=90-2282 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.01 OrthoFinder output from all 47 species
Sam_g11962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29126 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30252 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 83 130
IPR002885 Pentatricopeptide_repeat 288 334
IPR002885 Pentatricopeptide_repeat 185 232
No external refs found!