Pir_g12147

Description : DNA polymerase lambda *(POLL) & original description: none

Gene families : OG0003218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003218_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g12147

Target	Alias	Description	ECC score	Gene Family Method
Adi_g011938	No alias	DNA polymerase lambda *(POLL) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g10128	No alias	DNA polymerase lambda *(POLL) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02981	No alias	DNA polymerase lambda *(POLL) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g42634	No alias	DNA polymerase lambda *(POLL) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g006120.3.1	Solyc05g006120	DNA polymerase lambda	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034061	DNA polymerase activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR028207	DNA_pol_B_palm_palm	387	500
IPR001357	BRCT_dom	51	129
IPR018944	DNA_pol_lambd_fingers_domain	338	384
IPR010996	DNA_pol_b-like_N	251	316
IPR029398	PolB_thumb	506	575

External Links

No external refs found!