- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RCY1, ATRCY1
Description : regulatory protein *(CYCL) of cell cycle & original description: none
Gene families : OG0001825 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001825_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g12145 | |
| Cluster | HCCA: Cluster_223 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g29581 | RCY1, ATRCY1 | regulatory protein *(CYCL) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene56608.t1 | RCY1, ATRCY1,... | regulatory protein *(CYCL) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.33G050500.1 | RCY1, ATRCY1,... | regulatory protein *(CYCL) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021433.26 | No alias | Cell cycle.regulation.cyclins.CYCT-type cyclin | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g06939 | RCY1, ATRCY1 | regulatory protein *(CYCL) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g01404 | RCY1, ATRCY1 | regulatory protein *(CYCL) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31861 | RCY1, ATRCY1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g09089 | RCY1, ATRCY1 | regulatory protein *(CYCL) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03812 | RCY1, ATRCY1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007701 | RCY1, ATRCY1 | regulatory protein *(CYCL) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0099.g019513 | RCY1, ATRCY1 | regulatory protein *(CYCL) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10404 | No alias | regulatory protein *(CYCL) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24865 | RCY1, ATRCY1 | regulatory protein *(CYCL) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g01991 | RCY1, ATRCY1 | regulatory protein *(CYCL) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001671 | ATPase activator activity | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| MF | GO:0051087 | chaperone binding | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006671 | Cyclin_N | 10 | 147 |
| No external refs found! |