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  5. Pir_g11816

Pir_g11816


Description : not classified & original description: none


Gene families : OG0015919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11816
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
Dac_g30167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29141 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 582 629
IPR002885 Pentatricopeptide_repeat 175 222
IPR002885 Pentatricopeptide_repeat 73 122
IPR002885 Pentatricopeptide_repeat 685 731
IPR002885 Pentatricopeptide_repeat 380 426
IPR002885 Pentatricopeptide_repeat 482 528
IPR002885 Pentatricopeptide_repeat 786 833
IPR002885 Pentatricopeptide_repeat 277 324
IPR002885 Pentatricopeptide_repeat 456 480
IPR002885 Pentatricopeptide_repeat 659 680
IPR002885 Pentatricopeptide_repeat 761 781
IPR002885 Pentatricopeptide_repeat 862 884
No external refs found!