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  5. Pir_g11813

Pir_g11813


Description : Rab GTPase-activating protein & original description: none


Gene families : OG0001869 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001869_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11813
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Adi_g022435 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27558 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010545 No alias Rab GTPase-activating protein & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013092 No alias Rab GTPase-activating protein & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Cba_g26668 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g38950.1 LOC_Os05g38950 RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species
Ppi_g03980 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012999 No alias Rab GTPase-activating protein & original description:... 0.03 OrthoFinder output from all 47 species
Solyc04g009560.3.1 Solyc04g009560 RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species
Zm00001e038445_P005 Zm00001e038445 RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 220 445
No external refs found!