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  5. Pir_g11806

Pir_g11806 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11806
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.02 OrthoFinder output from all 47 species
Aev_g28850 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Als_g47842 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06718 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aob_g07406 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aob_g21747 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08864 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Aop_g16852 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cre12.g533351 CLPB3, CLPB-P, APG6 Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre43.g760497 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01008636001 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Gb_20703 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g32520.1 SAG15, CLPD,... chaperone component ClpD of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
LOC_Os12g12850.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
MA_229920g0010 CLPB3, CLPB-P, APG6 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp1g02560.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.01 OrthoFinder output from all 47 species
Mp5g14810.1 SAG15, CLPD, ERD1 chaperone component ClpD of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Nbi_g10414 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ore_g13933 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23962 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009809 HSP93-V, DCA1,... not classified & original description: CDS=1-1650 0.04 OrthoFinder output from all 47 species
Sam_g16601 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.07 OrthoFinder output from all 47 species
Sam_g16602 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Sam_g19448 No alias organellar chaperone *(Clp-p/Clp-m) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc12g042060.3.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.05 OrthoFinder output from all 47 species
Tin_g10070 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Zm00001e008312_P001 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species
Zm00001e040778_P001 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 630 805
IPR003959 ATPase_AAA_core 293 422
IPR004176 Clp_R_dom 178 229
IPR004176 Clp_R_dom 102 154
IPR019489 Clp_ATPase_C 811 890
IPR041546 ClpA/ClpB_AAA_lid 431 532
No external refs found!