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  5. Pir_g11331

Pir_g11331


Description : Rab GTPase-activating protein *(RabGAP21) & original description: none


Gene families : OG0002854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11331

Target Alias Description ECC score Gene Family Method Actions
Adi_g113500 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G064400.1 Ceric.02G064400 Rab GTPase-activating protein *(RabGAP21) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g01882 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Pir_g05714 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Solyc12g009610.2.1 Solyc12g009610 RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR021935 SGSM1/2_RBD 115 199
IPR000195 Rab-GTPase-TBC_dom 393 620
No external refs found!