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  5. Pir_g11240

Pir_g11240 (SBP1)


Aliases : SBP1

Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11240

Target Alias Description ECC score Gene Family Method Actions
Adi_g099544 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g09448 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23926 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24464 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0329.g065317 RING not classified & original description: CDS=1-1395 0.04 OrthoFinder output from all 47 species
Cba_g18320 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G040700.1 Ceric.13G040700 not classified & original description: pacid=50635980... 0.06 OrthoFinder output from all 47 species
LOC_Os02g46220.1 LOC_Os02g46220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g34020.1 RING, LOC_Os11g34020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g34080.1 LOC_Os11g34080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g14406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013554_P001 Zm00001e013554 Probable BOI-related E3 ubiquitin-protein ligase 2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!