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  5. Pir_g11192

Pir_g11192


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00240090 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 14... 0.03 OrthoFinder output from all 47 species
Adi_g021112 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021113 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13523 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00212.t1 ATAHL1, AHL1,... AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14342 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g49990.1 LOC_Os04g49990 AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g40285.1 LOC_Os05g40285 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g06268 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010139 No alias AHL clade-B transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g07849 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51610 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024390_P002 Zm00001e024390 AT-hook motif nuclear-localized protein 10... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004347 glucose-6-phosphate isomerase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 187 300
No external refs found!