1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g10717

Pir_g10717 (GR-RBP5)


Aliases : GR-RBP5

Description : not classified & original description: none


Gene families : OG0009633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g10717

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0009.g011832 CCR2, ATGRP7,... not classified & original description: CDS=1-1500 0.04 OrthoFinder output from all 47 species
Ceric.30G025800.1 Ceric.30G025800 not classified & original description: pacid=50608606... 0.02 OrthoFinder output from all 47 species
Dcu_g08114 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11118 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22718 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14228 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07779 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10697 GR-RBP5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19079 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 25 95
No external refs found!