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  5. Pir_g10376

Pir_g10376


Description : RAB5 plant-specific effector *(PUF2) & original description: none


Gene families : OG0003055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g10376

Target Alias Description ECC score Gene Family Method Actions
Adi_g059206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08509 No alias RAB5 plant-specific effector *(PUF2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002908 No alias not classified & original description: CDS=82-2079 0.03 OrthoFinder output from all 47 species
Spa_g17329 No alias RAB5 plant-specific effector *(PUF2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09222 No alias RAB5 plant-specific effector *(PUF2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033469_P001 Zm00001e033469 plant-specific RAB5 effector (PUF2) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!