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  5. Pir_g09990

Pir_g09990 (PRA1.B4)


Aliases : PRA1.B4

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09990

Target Alias Description ECC score Gene Family Method Actions
Aev_g05773 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0473.g072972 PRA1.B1 not classified & original description: CDS=1-327 0.03 OrthoFinder output from all 47 species
Cba_g19746 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G011000.1 PRA1.B5, Ceric.10G011000 B-G-class Rab-GDF protein & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.15G073700.1 PRA1.B2, Ceric.15G073700 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014691 PRA1.B2 B-G-class Rab-GDF protein & original description: CDS=1-618 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 35 175
No external refs found!