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  5. AT5G08470

AT5G08470 (PEX1)


Aliases : PEX1

Description : peroxisome 1


Gene families : OG_01_0000169 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000169_tree ,
OG_02_0007088 (LandPlants) Phylogenetic Tree(s): OG_02_0007088_tree ,
OG_03_0006976 (SeedPlants) Phylogenetic Tree(s): OG_03_0006976_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08470
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021463.10 No alias Cell division control protein 48 homolog D... 0.03 Archaeplastida
LOC_Os08g44240.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.02 Archaeplastida
Pp3c3_6980V3.1 No alias ATPase, AAA-type, CDC48 protein 0.03 Archaeplastida
Pp3c4_26860V3.1 No alias ATPase, AAA-type, CDC48 protein 0.02 Archaeplastida
Solyc06g074980.3.1 No alias platform ATPase (CDC48) 0.03 Archaeplastida
Zm00001e022089_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035514_P002 No alias Cell division control protein 48 homolog C... 0.04 Archaeplastida
Zm00001e036688_P001 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
LOC_Os08g44240.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.02 LandPlants
Zm00001e022089_P003 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os08g44240.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.02 SeedPlants
Zm00001e022089_P003 No alias no hits & (original description: none) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006635 fatty acid beta-oxidation IMP Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
BP GO:0007031 peroxisome organization RCA Interproscan
BP GO:0016558 protein import into peroxisome matrix IMP Interproscan
BP GO:0016558 protein import into peroxisome matrix RCA Interproscan
MF GO:0016887 ATPase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015342 PEX-N_psi_beta-barrel 109 182
IPR003959 ATPase_AAA_core 881 1006
IPR003959 ATPase_AAA_core 596 740
No external refs found!