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  5. Pir_g09833

Pir_g09833 (BTAF1, RGD3, CHA16,...)


Aliases : BTAF1, RGD3, CHA16, ATBTAF1, CHR16

Description : TATA box-binding protein-associated factor *(MOT1) & original description: none


Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09833

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00235880 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.02 OrthoFinder output from all 47 species
AMTR_s00012p00236000 BTAF1, RGD3,... No description available 0.02 OrthoFinder output from all 47 species
AT3G54280 BTAF1, RGD3,... DNA binding;ATP binding;nucleic acid... 0.06 OrthoFinder output from all 47 species
Adi_g086270 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Aev_g04198 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Als_g16472 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.05 OrthoFinder output from all 47 species
Aop_g70865 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013488 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Cba_g23640 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species
Ceric.27G041200.1 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species
Cre16.g687301 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Dcu_g03219 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01019359001 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.05 OrthoFinder output from all 47 species
Gb_19667 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.04 OrthoFinder output from all 47 species
LOC_Os02g06588.1 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.02 OrthoFinder output from all 47 species
LOC_Os02g06592.1 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.03 OrthoFinder output from all 47 species
Lfl_g35777 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.06 OrthoFinder output from all 47 species
MA_139472g0010 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
MA_79681g0010 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.03 OrthoFinder output from all 47 species
Mp6g18490.1 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.02 OrthoFinder output from all 47 species
Ore_g19191 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Ppi_g03292 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Sam_g29302 No alias TATA box-binding protein-associated factor *(MOT1) &... 0.05 OrthoFinder output from all 47 species
Smo186944 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Solyc08g074500.2.1 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.02 OrthoFinder output from all 47 species
Solyc08g074520.2.1 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
Spa_g08445 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 1815 1919
IPR000330 SNF2_N 1462 1760
IPR022707 Mot1_central_dom 769 1225
No external refs found!