Aliases : emb1507
Description : RNA helicase *(Brr2) & original description: none
Gene families : OG0001175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001175_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00114710 | emb1507,... | RNA processing.RNA splicing.spliceosome... | 0.05 | OrthoFinder output from all 47 species | |
AT5G61140 | No alias | U5 small nuclear ribonucleoprotein helicase | 0.03 | OrthoFinder output from all 47 species | |
Adi_g117139 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g01991 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g40053 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g09018 | No alias | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z134800.1 | Ceric.1Z134800 | not classified & original description: pacid=50597112... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.1Z263400.1 | Ceric.1Z263400 | RNA helicase *(Brr2) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000865.28 | emb1507 | DExH-box ATP-dependent RNA helicase DExH12... | 0.02 | OrthoFinder output from all 47 species | |
Cre17.g744147 | emb1507 | RNA processing.RNA splicing.spliceosome... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g02389 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g12553 | No alias | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g12876 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01010769001 | emb1507 | DExH-box ATP-dependent RNA helicase DExH12... | 0.03 | OrthoFinder output from all 47 species | |
Gb_18049 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g09106 | No alias | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_8113344g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.04 | OrthoFinder output from all 47 species | |
MA_823844g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | OrthoFinder output from all 47 species | |
MA_930633g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g06890.1 | emb1507 | RNA helicase (Brr2) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g15106 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0119.g021333 | emb1507 | RNA helicase *(Brr2) & original description: CDS=88-5190 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g18045 | No alias | RNA helicase *(Brr2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g36113 | No alias | RNA helicase *(Brr2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo410613 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g082100.4.1 | emb1507, Solyc06g082100 | RNA helicase (Brr2) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035676_P001 | emb1507, Zm00001e035676 | RNA helicase (Brr2) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e038727_P001 | Zm00001e038727 | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0032784 | regulation of DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | HCCA |
BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0045944 | positive regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
No external refs found! |