1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g09791

Pir_g09791 (ATHAM3, HAM3, LOM3)


Aliases : ATHAM3, HAM3, LOM3

Description : GRAS-type transcription factor & original description: none


Gene families : OG0002830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09791

Target Alias Description ECC score Gene Family Method Actions
Adi_g057381 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107878 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12814 HAM2, LOM2, ATHAM2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 604 973
No external refs found!