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  5. Pir_g09739

Pir_g09739 (LRS1)


Aliases : LRS1

Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09739

Target Alias Description ECC score Gene Family Method Actions
Ala_g02471 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.06G068400.1 LRS1, Ceric.06G068400 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cre13.g583250 LRS1 No description available 0.01 OrthoFinder output from all 47 species
Dac_g09416 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_555156g0010 LRS1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g09950.1 LRS1 Flagellar WD repeat-containing protein Pf20... 0.02 OrthoFinder output from all 47 species
Msp_g01213 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Pp3c1_36050V3.1 LRS1, Pp3c1_36050 Transducin/WD40 repeat-like superfamily protein 0.01 OrthoFinder output from all 47 species
Solyc01g098090.3.1 LRS1, Solyc01g098090 Dynein assembly factor with WDR repeat domains 1... 0.05 OrthoFinder output from all 47 species
Zm00001e039445_P001 LRS1, Zm00001e039445 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR021772 WDR48/Bun107 613 758
IPR001680 WD40_repeat 214 246
IPR001680 WD40_repeat 252 288
IPR001680 WD40_repeat 293 328
No external refs found!