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  5. Pir_g09523

Pir_g09523 (WTF1, AtWTF1)


Aliases : WTF1, AtWTF1

Description : plastidial RNA basal splicing factor *(WTF1) & original description: none


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09523

Target Alias Description ECC score Gene Family Method Actions
Adi_g113144 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Als_g22428 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g37366 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34308.t1 WTF1, AtWTF1,... plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.24G041500.1 WTF1, AtWTF1,... plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.25G074200.1 WTF1, AtWTF1,... not classified & original description: pacid=50593386... 0.05 OrthoFinder output from all 47 species
GSVIVT01027077001 WTF1, AtWTF1 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_34809 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g49610.1 WTF1, AtWTF1,... WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
Len_g11779 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Len_g49382 WTF1, AtWTF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_158434g0010 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.02 OrthoFinder output from all 47 species
MA_423098g0010 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
Msp_g11347 WTF1, AtWTF1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04260 WTF1, AtWTF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08880 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g10439 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g35883 No alias plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g12812 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026570_P001 WTF1, AtWTF1,... WTF1 plastidial RNA basal splicing factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 64 389
No external refs found!