AT5G08130 (BIM1)


Aliases : BIM1

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0003047 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003047_tree ,
OG_02_0002401 (LandPlants) Phylogenetic Tree(s): OG_02_0002401_tree ,
OG_03_0002205 (SeedPlants) Phylogenetic Tree(s): OG_03_0002205_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08130
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Zm00001e034451_P006 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034451_P006 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e034451_P006 No alias transcription factor (bHLH) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006351 transcription, DNA-templated IMP Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0009742 brassinosteroid mediated signaling pathway IGI Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Interproscan
BP GO:0010072 primary shoot apical meristem specification RCA Interproscan
BP GO:1902448 positive regulation of shade avoidance IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 158 207
No external refs found!