1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g09426

Pir_g09426


Description : methylation reader *(MBD10-11) & original description: none


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09426

Target Alias Description ECC score Gene Family Method Actions
Adi_g022930 No alias methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g056751 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056752 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058503 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110470 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08850 MBD10 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08851 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010960 No alias methylation reader *(MBD10-11) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g12114 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16870 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15557 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05717 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07494 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00492 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15405 No alias methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03856 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018451 MBD10 methylation reader *(MBD10-11) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g52624 No alias methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 26 90
No external refs found!