AT5G07810


Description : SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein


Gene families : OG_01_0005923 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005923_tree ,
OG_02_0009245 (LandPlants) Phylogenetic Tree(s): OG_02_0009245_tree ,
OG_03_0010620 (SeedPlants) Phylogenetic Tree(s): OG_03_0010620_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G07810
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001368.11 No alias No description available 0.01 Archaeplastida
Cre12.g494200 No alias No description available 0.02 Archaeplastida
GSVIVT01007916001 No alias Chromatin organisation.chromatin remodeling... 0.05 Archaeplastida
GSVIVT01007916001 No alias Chromatin organisation.chromatin remodeling... 0.05 LandPlants
Pp3c1_13308V3.1 No alias SNF2 domain-containing protein / helicase... 0.02 LandPlants
Zm00001e035473_P001 No alias chromatin remodeling factor (SMARCAL1) 0.03 LandPlants
GSVIVT01007916001 No alias Chromatin organisation.chromatin remodeling... 0.05 SeedPlants
Zm00001e035473_P001 No alias chromatin remodeling factor (SMARCAL1) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0004386 helicase activity ISS Interproscan
MF GO:0005524 ATP binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006310 DNA recombination RCA Interproscan
BP GO:0010332 response to gamma radiation RCA Interproscan
BP GO:0032204 regulation of telomere maintenance RCA Interproscan
BP GO:0043247 telomere maintenance in response to DNA damage RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 551 651
IPR002711 HNH 1082 1114
IPR000330 SNF2_dom 222 453
No external refs found!