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  5. Pir_g08660

Pir_g08660 (ATHDA19, HDA1, HD1,...)


Aliases : ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none


Gene families : OG0000827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g08660

Target Alias Description ECC score Gene Family Method Actions
Cba_g13162 HDA09, HDA9 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Ceric.03G095800.1 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005747 ATHDA19, HDA1,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Solyc06g071680.4.1 HDA6, RTS1,... class-I histone deacetylase 0.03 OrthoFinder output from all 47 species
Spa_g18542 HDA09, HDA9 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 35 324
No external refs found!