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  5. Pir_g08622

Pir_g08622 (ATUBC1, UBC1)


Aliases : ATUBC1, UBC1

Description : E2 ubiquitin-conjugating enzyme *(UBC1) & original description: none


Gene families : OG0003855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g08622
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Als_g25925 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Als_g44232 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009122 ATUBC1, UBC1 not classified & original description: CDS=204-665 0.02 OrthoFinder output from all 47 species
Azfi_s0076.g037796 ATUBC1, UBC1 not classified & original description: CDS=102-560 0.03 OrthoFinder output from all 47 species
Ceric.15G032400.1 ATUBC1, UBC1,... E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Dde_g00161 ATUBC2, UBC2 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
MA_10436547g0020 ATUBC1, UBC1 Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 9 146
No external refs found!