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  5. Pir_g07440

Pir_g07440 (GH3.5, WES1)


Aliases : GH3.5, WES1

Description : not classified & original description: none


Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g07440
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Aop_g15411 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.05 OrthoFinder output from all 47 species
Cba_g43207 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z009000.1 DFL1, GH3.6,... not classified & original description: pacid=50632766... 0.06 OrthoFinder output from all 47 species
Dac_g05671 GH3.5, WES1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01001112001 GH3.17 Indole-3-acetic acid-amido synthetase GH3.17... 0.06 OrthoFinder output from all 47 species
LOC_Os01g55940.1 GH3.1, LOC_Os01g55940 indole-3-acetic acid-amido synthetase 0.04 OrthoFinder output from all 47 species
LOC_Os11g32510.1 GH3.17, LOC_Os11g32510 Indole-3-acetic acid-amido synthetase GH3.17... 0.02 OrthoFinder output from all 47 species
LOC_Os11g32520.1 GH3.17, LOC_Os11g32520 Probable indole-3-acetic acid-amido synthetase GH3.13... 0.02 OrthoFinder output from all 47 species
Zm00001e019720_P002 GH3.1, Zm00001e019720 indole-3-acetic acid-amido synthetase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004993 GH3 57 638
No external refs found!