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  5. Pir_g07287

Pir_g07287


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0001886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g07287

Target Alias Description ECC score Gene Family Method Actions
AT5G49430 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.03 OrthoFinder output from all 47 species
Adi_g074760 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g077954 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aev_g18824 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g02628 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene53113.t1 Aspi01Gene53113 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cba_g17526 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cre02.g078150 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g03214 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dcu_g12050 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01028117001 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01035014001 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Len_g10488 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_58934g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g44688 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024725 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g29282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g060040.3.1 Solyc01g060040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g079510.3.1 Solyc01g079510 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Tin_g20120 No alias substrate adaptor of CUL4-based E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0017182 peptidyl-diphthamide metabolic process IEP HCCA
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018202 peptidyl-histidine modification IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1900247 regulation of cytoplasmic translational elongation IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 411 436
IPR001680 WD40_repeat 248 284
IPR001680 WD40_repeat 291 326
IPR001680 WD40_repeat 589 628
IPR001680 WD40_repeat 332 372
No external refs found!