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  5. Pir_g07151

Pir_g07151


Description : helicase UAP56 & original description: none


Gene families : OG0002123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g07151

Target Alias Description ECC score Gene Family Method Actions
Aev_g13080 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0557.g076900 No alias helicase UAP56 & original description: CDS=1-1608 0.03 OrthoFinder output from all 47 species
Cba_g12256 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56014 No alias helicase UAP56 & original description: none 0.02 OrthoFinder output from all 47 species
MA_10317345g0020 No alias DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Ore_g07693 No alias helicase UAP56 & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40258 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51328 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47104 No alias helicase UAP56 & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 277 384
IPR011545 DEAD/DEAH_box_helicase_dom 72 237
No external refs found!