1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g07014

Pir_g07014


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g07014
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Adi_g054784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g46489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G034800.1 Ceric.23G034800 not classified & original description: pacid=50611547... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.27 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g06314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
    • Type GO Term Name Evidence Source
    CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
    MF GO:0003824 catalytic activity IEP HCCA
    MF GO:0004672 protein kinase activity IEP HCCA
    MF GO:0005215 transporter activity IEP HCCA
    MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
    CC GO:0005739 mitochondrion IEP HCCA
    BP GO:0006468 protein phosphorylation IEP HCCA
    BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
    BP GO:0006810 transport IEP HCCA
    MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
    BP GO:0008150 biological_process IEP HCCA
    MF GO:0008168 methyltransferase activity IEP HCCA
    BP GO:0009987 cellular process IEP HCCA
    BP GO:0015858 nucleoside transport IEP HCCA
    BP GO:0015931 nucleobase-containing compound transport IEP HCCA
    MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
    MF GO:0016301 kinase activity IEP HCCA
    BP GO:0016310 phosphorylation IEP HCCA
    MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
    MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
    MF GO:0016740 transferase activity IEP HCCA
    MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
    MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
    MF GO:0019842 vitamin binding IEP HCCA
    MF GO:0022857 transmembrane transporter activity IEP HCCA
    MF GO:0030170pyridoxal phosphate binding IEP HCCA
    BP GO:0030328 prenylcysteine catabolic process IEP HCCA
    BP GO:0030329 prenylcysteine metabolic process IEP HCCA
    CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
    CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
    BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
    MF GO:0036094 small molecule binding IEP HCCA
    BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
    MF GO:0043168 anion binding IEP HCCA
    BP GO:0051179 localization IEP HCCA
    BP GO:0051234 establishment of localization IEP HCCA
    BP GO:0055085 transmembrane transport IEP HCCA
    MF GO:0070279 vitamin B6 binding IEP HCCA
    BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
    BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
    BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
    MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
    MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
    BP GO:1901264 carbohydrate derivative transport IEP HCCA
    MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
    BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
    BP GO:1901642 nucleoside transmembrane transport IEP HCCA
    BP GO:1902600 proton transmembrane transport IEP HCCA
    InterPro domains Description Start Stop
    IPR000504 RRM_dom 8 65
    IPR000504 RRM_dom 111 169
    No external refs found!