AT5G05180


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG_01_0000532 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000532_tree ,
OG_02_0011448 (LandPlants) Phylogenetic Tree(s): OG_02_0011448_tree ,
OG_03_0011556 (SeedPlants) Phylogenetic Tree(s): OG_03_0011556_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G05180
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011002001 No alias Cytoskeleton.microfilament network.actin-membrane... 0.07 Archaeplastida
GSVIVT01032654001 No alias Cytoskeleton.microfilament network.actin-membrane... 0.05 Archaeplastida
Solyc05g051390.3.1 No alias actin-binding protein (NET2) 0.03 Archaeplastida
Solyc09g074470.3.1 No alias actin-binding protein (NET3). actin-binding protein... 0.08 Archaeplastida
Zm00001e010923_P001 No alias actin-binding protein (NET3). actin-binding protein... 0.02 Archaeplastida
Zm00001e031073_P001 No alias actin-binding protein (NET4) 0.03 Archaeplastida
GSVIVT01032654001 No alias Cytoskeleton.microfilament network.actin-membrane... 0.04 LandPlants
GSVIVT01032654001 No alias Cytoskeleton.microfilament network.actin-membrane... 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009165 nucleotide biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!