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  5. Pir_g06323

Pir_g06323 (CcdA)


Aliases : CcdA

Description : assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II) & original description: none


Gene families : OG0007286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g06323

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00174500 CcdA,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Adi_g026246 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Aev_g07709 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Aob_g06460 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Aop_g12125 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.11 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dde_g04751 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ehy_g18885 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Lfl_g28455 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Mp5g11540.1 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Msp_g37293 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Nbi_g07517 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ore_g21830 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Pnu_g13677 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Ppi_g15921 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008168 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Sam_g09743 No alias assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Sam_g28294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g063570.4.1 CcdA, Solyc07g063570 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Spa_g16978 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.09 OrthoFinder output from all 47 species
Tin_g31999 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Zm00001e009192_P002 CcdA, Zm00001e009192 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017004 cytochrome complex assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003834 Cyt_c_assmbl_TM_dom 131 338
No external refs found!