Smo270954 (PACid_15401824)

Aliases : PACid_15401824

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation. ATHB-15 CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287) BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1) Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0 Bacteria - 0 Metazoa - 767 Fungi - 91 Plants - 2233 Viruses - 0 Other Eukaryotes - 35 (source: NCBI BLink). (original description: no original description)'

Gene families : OG_01_0000594 (Gene family) Phylogenetic Tree(s): OG0000594_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Smo270954
Cluster HCCA cluster: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT2G34710 PHB-1D, ATHB-14,... Homeobox-leucine zipper family protein / lipid-binding... 0.03 Gene family
AT5G60690 IFL1, IFL, REV Homeobox-leucine zipper family protein / lipid-binding... 0.03 Gene family
Solyc11g069470.2.1 Solyc11g069470.2 33.99 development.unspecified REVOLUTA regulates... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013978 MEKHLA 697 837
No external refs found!