Pir_g05953


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g05953

Target Alias Description ECC score Gene Family Method Actions
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g036452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096184 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30861 OTP84 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g16233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19105 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26615 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55228 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20543.t1 EMB2758, Aspi01Gene20543 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene33635.t1 Aspi01Gene33635 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35417.t1 OTP82, Aspi01Gene35417 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36455.t1 CRR21, Aspi01Gene36455 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38554.t1 VAC1, ECB2,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene49895.t1 CRR22, Aspi01Gene49895 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene52586.t1 Aspi01Gene52586 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57285.t1 Aspi01Gene57285 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0021.g015651 No alias not classified & original description: CDS=67-2907 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025669 No alias not classified & original description: CDS=1-1770 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026305 EMB2758 not classified & original description: CDS=1-1827 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026394 OTP86 not classified & original description: CDS=1-2238 0.02 OrthoFinder output from all 47 species
Azfi_s0062.g035166 No alias not classified & original description: CDS=1-3372 0.02 OrthoFinder output from all 47 species
Azfi_s0126.g048644 No alias not classified & original description: CDS=1-2160 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053510 No alias not classified & original description: CDS=1-2550 0.02 OrthoFinder output from all 47 species
Azfi_s0162.g054179 No alias not classified & original description: CDS=1-2562 0.02 OrthoFinder output from all 47 species
Azfi_s0242.g059832 No alias not classified & original description: CDS=1-2646 0.02 OrthoFinder output from all 47 species
Azfi_s0257.g060586 No alias not classified & original description: CDS=1-3168 0.02 OrthoFinder output from all 47 species
Azfi_s0371.g067098 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2013 0.02 OrthoFinder output from all 47 species
Azfi_s0425.g069243 No alias not classified & original description: CDS=144-3230 0.02 OrthoFinder output from all 47 species
Cba_g20069 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g20531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45997 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G009900.1 Ceric.34G009900 not classified & original description: pacid=50623876... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g21461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07807 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g08846 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40897 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g47935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000719001 OSB1 Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 OrthoFinder output from all 47 species
GSVIVT01011333001 SLO1 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.01 OrthoFinder output from all 47 species
Len_g05433 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g18053 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g44150 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.04 OrthoFinder output from all 47 species
Nbi_g24205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002051 REME1 not classified & original description: CDS=1-1467 0.01 OrthoFinder output from all 47 species
Sam_g14281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39170 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g20189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 3 33
No external refs found!